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    BIOINFORMATICS
    2007
    42views more  BIOINFORMATICS 2007»
    Query-driven module discovery in microarray data
    13 years 4 months ago
    Query-driven module discovery in microarray data
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    Thomas Dhollander, Qizheng Sheng, Karen Lemmens, B...
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    DILS
    2008
    Springer
    179views Life Sciences» more  DILS 2008»
    Semi Supervised Spectral Clustering for Regulatory Module Discovery
    13 years 6 months ago
    Semi Supervised Spectral Clustering for Regulatory Module Discovery
    Download  www.doc.ic.ac.uk
    We propose a novel semi-supervised clustering method for the task of gene regulatory module discovery. The technique uses data on dna binding as prior knowledge to guide the proces...
    Alok Mishra, Duncan Gillies
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    BMCBI
    2007
    146views more  BMCBI 2007»
    Bayesian hierarchical model for transcriptional module discovery by jointly modeling gene expression and ChIP-chip data
    13 years 4 months ago
    Bayesian hierarchical model for transcriptional module discovery by jointly modeling gene expression and ChIP-chip data
    Download  www.biomedcentral.com
    Background: Transcriptional modules (TM) consist of groups of co-regulated genes and transcription factors (TF) regulating their expression. Two high-throughput (HT) experimental ...
    Xiangdong Liu, Walter J. Jessen, Siva Sivaganesan,...
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    RECOMB
    2006
    Springer
    202views Computational Biology» more  RECOMB 2006»
    Genome-Wide Discovery of Modulators of Transcriptional Interactions in Human B Lymphocytes
    14 years 4 months ago
    Genome-Wide Discovery of Modulators of Transcriptional Interactions in Human B Lymphocytes
    Download  www.menem.com
    Abstract. Transcriptional interactions in a cell are modulated by a variety of mechanisms that prevent their representation as pure pairwise interactions between a transcription fa...
    Kai Wang, Ilya Nemenman, Nilanjana Banerjee, Adam ...
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    BMCBI
    2007
    227views more  BMCBI 2007»
    Growing functional modules from a seed protein via integration of protein interaction and gene expression data
    13 years 4 months ago
    Growing functional modules from a seed protein via integration of protein interaction and gene expression data
    Download  www.biomedcentral.com
    Background: Nowadays modern biology aims at unravelling the strands of complex biological structures such as the protein-protein interaction (PPI) networks. A key concept in the o...
    Ioannis A. Maraziotis, Konstantina Dimitrakopoulou...
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