Sciweavers

21 search results - page 2 / 5
» Rearrangement Models and Single-Cut Operations
Sort
View
RECOMB
2009
Springer
14 years 2 days ago
Counting All DCJ Sorting Scenarios
In genome rearrangements, the double cut and join (DCJ) operation, introduced by Yancopoulos et al., allows to represent most rearrangement events that could happen in multichromos...
Marília D. V. Braga, Jens Stoye
IJFCS
2007
79views more  IJFCS 2007»
13 years 5 months ago
Intra-Molecular Template-Guided Recombination
The stichotrichous ciliates are uni-cellular organisms which undergo a series of complex unscrambling of genetic encodings. This ability to rearrange DNA to produce the correct pr...
Mark Daley, Michael Domaratzki, Alexis Morris
JCB
2002
102views more  JCB 2002»
13 years 5 months ago
A Lower Bound on the Reversal and Transposition Diameter
One possible model to study genome evolution is to represent genomes as permutations of genes and compute distances based on the minimum number of certain operations (rearrangemen...
João Meidanis, Maria Emilia Telles Walter, ...
WABI
2010
Springer
160views Bioinformatics» more  WABI 2010»
13 years 3 months ago
Genomic Distance with DCJ and Indels
The double cut and join (DCJ) operation, introduced by Yancopoulos, Attie and Friedberg in 2005, allows one to represent most rearrangement events in genomes. However, a DCJ cannot...
Marília D. V. Braga, Eyla Willing, Jens Sto...
DAM
2008
75views more  DAM 2008»
13 years 5 months ago
Patterns of simple gene assembly in ciliates
The intramolecular model for gene assembly in ciliates considers three operations, ld, hi, and dlad that can assemble any gene pattern through folding and recombination: the molec...
Tero Harju, Ion Petre, Vladimir Rogojin, Grzegorz ...