117 search results - page 3 / 24 » Reconstructing the Topology of Protein Complexes |
BMCBI
2006
13 years 5 months ago
2006
Background: Protein topology representations such as residue contact maps are an important intermediate step towards ab initio prediction of protein structure. Although improvemen...
WABI
2001
Springer
13 years 10 months ago
2001
Springer
We describe algorithms for pattern matching and pattern learning in TOPS diagrams (formal descriptions of protein topologies). These problems can be reduced to checking for subgrap...
RECOMB
2004
Springer
14 years 5 months ago
2004
Springer
Protein-protein interactions, which form the basis for most cellular processes, result in the formation of protein interfaces. Believing that the local shape of proteins is crucia...
BMCBI
2005
13 years 5 months ago
2005
Background: Popular methods to reconstruct molecular phylogenies are based on multiple sequence alignments, in which addition or removal of data may change the resulting tree topo...
VISUALIZATION
2000
IEEE
13 years 9 months ago
2000
IEEE
We present a new approach to surface reconstruction based on the Delaunay complex. First we give a simple and fast algorithm that picks locally a surface at each vertex. For that,...