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» Repeat-aware Comparative Genome Assembly
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WABI
2009
Springer
156views Bioinformatics» more  WABI 2009»
14 years 7 days ago
Phylogenetic Comparative Assembly
Recent high throughput sequencing technologies are capable of generating a huge amount of data for bacterial genome sequencing projects. Although current sequence assemblers succes...
Peter Husemann, Jens Stoye
GCB
2010
Springer
182views Biometrics» more  GCB 2010»
13 years 3 months ago
Repeat-aware Comparative Genome Assembly
: The current high-throughput sequencing technologies produce gigabytes of data even when prokaryotic genomes are processed. In a subsequent assembly phase, the generated overlappi...
Peter Husemann, Jens Stoye
HICSS
2003
IEEE
166views Biometrics» more  HICSS 2003»
13 years 11 months ago
Comparative Genome Annotation for Mapping, Prediction and Discovery of Genes
We have used comparative genome analyses to produce annotated maps for large genomic loci. The first example is a locus on mouse chromosome 9 that is syntenic to human chromosome ...
Claudia Kappen, J. Michael Salbaum
BMCBI
2010
133views more  BMCBI 2010»
13 years 5 months ago
Improving de novo sequence assembly using machine learning and comparative genomics for overlap correction
Background: With the rapid expansion of DNA sequencing databases, it is now feasible to identify relevant information from prior sequencing projects and completed genomes and appl...
Lance E. Palmer, Mathäus Dejori, Randall A. B...
BIB
2004
76views more  BIB 2004»
13 years 5 months ago
Comparative genome assembly
Mihai Pop, Adam M. Phillippy, Arthur L. Delcher, S...