43 search results - page 4 / 9 » SIMAP - The similarity matrix of proteins |
CMSB
2008
Springer
13 years 7 months ago
2008
Springer
Abstract. We present a formal analysis of amino acid replacement during mRNA translation. Building on an abstract stochastic model of arrival of tRNAs and their processing at the r...
BCB
2010
13 years 21 days ago
2010
Markov Clustering (MCL) is a popular algorithm for clustering networks in bioinformatics such as protein-protein interaction networks and protein similarity networks. An important...
BMCBI
2010
13 years 5 months ago
2010
Background: Matrix metalloproteinases (MMPs) are well-known biological targets implicated in tumour progression, homeostatic regulation, innate immunity, impaired delivery of pro-...
ALMOB
2008
13 years 5 months ago
2008
Background: Protein structure alignments are usually based on very different techniques to sequence alignments. We propose a method which treats sequence, structure and even combi...
DASFAA
2005
IEEE
13 years 11 months ago
2005
IEEE
A novel approach for similarity search on the protein structure databases is proposed. PADS (Protein Alignment by Directional shape Signatures) incorporates the three dimensional ...