9 search results - page 1 / 2 » SMOTIF: efficient structured pattern and profile motif searc... |
ALMOB
2006
13 years 4 months ago
2006
BIRD
2008
Springer
13 years 6 months ago
2008
Springer
We study the problem of structured motif search in DNA sequences. This is a fundamental task in bioinformatics which contributes to better understanding of genome characteristics a...
RECOMB
2004
Springer
14 years 4 months ago
2004
Springer
In this paper we describe an algorithm for the localization of structured models, i.e. sequences of (simple) motifs and distance constraints. It basically combines standard patter...
BMCBI
2006
13 years 4 months ago
2006
Background: The discovery of cis-regulatory motifs still remains a challenging task even though the number of sequenced genomes is constantly growing. Computational analyses using...
ICML
2010
IEEE
13 years 5 months ago
2010
IEEE
Markov logic networks (MLNs) use firstorder formulas to define features of Markov networks. Current MLN structure learners can only learn short clauses (4-5 literals) due to extre...