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JMLR
2010
111views more  JMLR 2010»
12 years 11 months ago
Single versus Multiple Sorting in All Pairs Similarity Search
To save memory and improve speed, vectorial data such as images and signals are often represented as strings of discrete symbols (i.e., sketches). Chariker (2002) proposed a fast ...
Yasuo Tabei, Takeaki Uno, Masashi Sugiyama, Koji T...
RECOMB
2004
Springer
14 years 5 months ago
Designing multiple simultaneous seeds for DNA similarity search
The challenge of similarity search in massive DNA sequence databases has inspired major changes in BLAST-style alignment tools, which accelerate search by inspecting only pairs of...
Yanni Sun, Jeremy Buhler
BMCBI
2005
152views more  BMCBI 2005»
13 years 4 months ago
CoPub Mapper: mining MEDLINE based on search term co-publication
Background: High throughput microarray analyses result in many differentially expressed genes that are potentially responsible for the biological process of interest. In order to ...
Blaise T. F. Alako, Antoine Veldhoven, Sjozef van ...
NAR
2007
152views more  NAR 2007»
13 years 4 months ago
COMPASS server for remote homology inference
COMPASS is a method for homology detection and local alignment construction based on the comparison of multiple sequence alignments (MSAs). The method derives numerical profiles f...
Ruslan Sadreyev, Ming Tang, Bong-Hyun Kim, Nick V....
CLEF
2005
Springer
13 years 10 months ago
CLEF 2005: Multilingual Retrieval by Combining Multiple Multilingual Ranked Lists
: We participated in two tasks: Multi-8 two-years-on retrieval and Multi-8 results merging. For our multi-8 two-years-on retrieval work, simple multilingual ranked lists are first ...
Luo Si, Jamie Callan