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BIBE
2008
IEEE
111views Bioinformatics» more  BIBE 2008»
13 years 6 months ago
Structure learning for biomolecular pathways containing cycles
Bayesian network structure learning is a useful tool for elucidation of regulatory structures of biomolecular pathways. The approach however is limited by its acyclicity constraint...
S. Itani, Karen Sachs, Garry P. Nolan, M. A. Dahle...
ICDM
2006
IEEE
152views Data Mining» more  ICDM 2006»
13 years 10 months ago
Application of Graph-based Data Mining to Metabolic Pathways
We present a method for finding biologically meaningful patterns on metabolic pathways using the SUBDUE graph-based relational learning system. A huge amount of biological data t...
Chang Hun You, Lawrence B. Holder, Diane J. Cook
ICML
2009
IEEE
14 years 5 months ago
Unsupervised hierarchical modeling of locomotion styles
This paper describes an unsupervised learning technique for modeling human locomotion styles, such as distinct related activities (e.g. running and striding) or variations of the ...
Wei Pan, Lorenzo Torresani
BIOCOMP
2006
13 years 6 months ago
Dynamic Bayesian Network (DBN) with Structure Expectation Maximization (SEM) for Modeling of Gene Network from Time Series Gene
Exploring gene regulatory network is a key topic in molecular biology. In this paper, we present a new dynamic Bayesian network (DBN) framework embedded with structural expectatio...
Yu Zhang, Zhidong Deng, Hongshan Jiang, Peifa Jia
RECOMB
2004
Springer
14 years 4 months ago
Modeling and Analysis of Heterogeneous Regulation in Biological Networks
Abstract. In this study we propose a novel model for the representation of biological networks and provide algorithms for learning model parameters from experimental data. Our appr...
Irit Gat-Viks, Amos Tanay, Ron Shamir