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» The KEGG databases at GenomeNet
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NAR
2008
112views more  NAR 2008»
13 years 4 months ago
AAindex: amino acid index database, progress report 2008
AAindex is a database of numerical indices representing various physicochemical and biochemical properties of amino acids and pairs of amino acids. We have added a collection of p...
Shuichi Kawashima, Piotr Pokarowski, Maria Pokarow...
NAR
2000
108views more  NAR 2000»
13 years 4 months ago
AAindex: Amino Acid index database
AAindex is a database of numerical indices representing various physicochemical and biochemical properties of amino acids and pairs of amino acids. It consists of two sections: AA...
Shuichi Kawashima, Minoru Kanehisa
IEEECGIV
2006
IEEE
13 years 11 months ago
PathBank: Web-Based Querying and Visualziation of an Integrated Biological Pathway Database
PathBank is a web-based query and visualization system for biological pathways using an integrated pathway database. To address the needs for biologists to visualize and analyze b...
Joshua Wing Kei Ho, Tristan Manwaring, Seok-Hee Ho...
APBC
2004
122views Bioinformatics» more  APBC 2004»
13 years 6 months ago
Integrating Biopathway Databases for Large-scale Modeling and Simulation
Biopathway databases have been developed, such as KEGG and EcoCyc, that compile interaction structures of biopathways together with biological annotations. However, these biopathw...
Masao Nagasaki, Atsushi Doi, Hiroshi Matsuno, Sato...
NAR
2007
95views more  NAR 2007»
13 years 4 months ago
VisANT 3.0: new modules for pathway visualization, editing, prediction and construction
With the integration of the KEGG and Predictome databases as well as two search engines for coexpressed genes/proteins using data sets obtained from the Stanford Microarray Databa...
Zhenjun Hu, David M. Ng, Takuji Yamada, Chunnuan C...