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» Tool for Storm Analysis Using Multiple Data Sets
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CSB
2004
IEEE
152views Bioinformatics» more  CSB 2004»
13 years 8 months ago
Comparative Analysis of Gene Sets in the Gene Ontology Space under the Multiple Hypothesis Testing Framework
The Gene Ontology (GO) resource can be used as a powerful tool to uncover the properties shared among, and specific to, a list of genes produced by high-throughput functional geno...
Sheng Zhong, Lu Tian, Cheng Li, Kai-Florian Storch...
RECOMB
2005
Springer
14 years 5 months ago
Combinatorial Genetic Regulatory Network Analysis Tools for High Throughput Transcriptomic Data
: A series of genome-scale algorithms and high-performance implementations is described and shown to be useful in the genetic analysis of gene transcription. With them it is possib...
Elissa J. Chesler, Michael A. Langston
KDD
2009
ACM
174views Data Mining» more  KDD 2009»
13 years 11 months ago
Visual exploration of categorical and mixed data sets
For categorical data there does not exist any similarity measure which is as straight forward and general as the numerical distance between numerical items. Due to this it is ofte...
Sara Johansson
BMCBI
2011
12 years 8 months ago
Gene set analysis for longitudinal gene expression data
Background: Gene set analysis (GSA) has become a successful tool to interpret gene expression profiles in terms of biological functions, molecular pathways, or genomic locations. ...
Ke Zhang, Haiyan Wang, Arne C. Bathke, Solomon W. ...
BMCBI
2010
171views more  BMCBI 2010»
13 years 5 months ago
PyMix - The Python mixture package - a tool for clustering of heterogeneous biological data
Background: Cluster analysis is an important technique for the exploratory analysis of biological data. Such data is often high-dimensional, inherently noisy and contains outliers...
Benjamin Georgi, Ivan Gesteira Costa, Alexander Sc...