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» Topics in the theory of DNA computing
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BIBM
2010
IEEE
151views Bioinformatics» more  BIBM 2010»
13 years 3 months ago
Probabilistic topic modeling for genomic data interpretation
Recently, the concept of a species containing both core and distributed genes, known as the supra- or pangenome theory, has been introduced. In this paper, we aim to develop a new ...
Xin Chen, Xiaohua Hu, Xiajiong Shen, Gail Rosen
BICOB
2010
Springer
13 years 10 months ago
Algebraic Theory of DNA Recombination
In this paper we investigate the structure and representation of n-ary algebras arising from DNA recombination, where n is a number of DNA segments participating in recombination. ...
Sergei R. Sverchkov
RECOMB
2000
Springer
13 years 9 months ago
A compression algorithm for DNA sequences and its applications in genome comparison
We present a lossless compression algorithm, GenCompress, for genetic sequences, based on searching for approximate repeats. Our algorithm achieves the best compression ratios for...
Xin Chen, Sam Kwong, Ming Li
ACE
2004
162views Education» more  ACE 2004»
13 years 7 months ago
Computing Theory With Relevance
In computer science education, the topic of computing theory is one that is commonly not well received by students. Career-oriented students often view the topic as irrelevant, an...
Wayne Brookes
SOCIALCOM
2010
13 years 3 months ago
A Methodology for Integrating Network Theory and Topic Modeling and its Application to Innovation Diffusion
Text data pertaining to socio-technical networks often are analyzed separately from relational data, or are reduced to the fact and strength of the flow of information between node...
Jana Diesner, Kathleen M. Carley