35 search results - page 4 / 7 » Topology and prediction of RNA pseudoknots |
RECOMB
2006
Springer
14 years 6 months ago
2006
Springer
In this paper, we address the problem of discovering novel non-coding RNA (ncRNA) using primary sequence, and secondary structure conservation, focusing on ncRNA families with pseu...
BIBE
2007
IEEE
14 years 11 days ago
2007
IEEE
-We demonstrate a new algorithm named FlexStem to predict RNA secondary structures with pseudoknots. Our approach is based on the free energy minimization criterion, and utilizes a...
WABI
2007
Springer
14 years 3 days ago
2007
Springer
Predicting the secondary structure of an RNA sequence is an important problem in structural bioinformatics. The general RNA folding problem, where the sequence to be folded may con...
RECOMB
2009
Springer
14 years 6 months ago
2009
Springer
Prediction and alignment of RNA pseudoknot structures are NP-hard. Nevertheless, several efficient prediction algorithms by dynamic programming have been proposed for restricted cl...
ISBRA
2007
Springer
14 years 5 days ago
2007
Springer
Abstract. The lattice approach to biological structural analysis was made popular by the HP model for protein folding, but had not been used previously for RNA secondary structure ...