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CPM
2001
Springer
108views Combinatorics» more  CPM 2001»
13 years 10 months ago
A Very Elementary Presentation of the Hannenhalli-Pevzner Theory
In 1995, Hannenhalli and Pevzner gave a first polynomial solution to the problem of finding the minimum number of reversals needed to sort a signed permutation.Their solution, a...
Anne Bergeron
DAM
2007
120views more  DAM 2007»
13 years 5 months ago
Advances on sorting by reversals
Theproblemofsortingsignedpermutationsbyreversalsisinspiredbygenomerearrangementproblemsincomputationalmolecular biology. Given two genomes represented as signed permutations of th...
Eric Tannier, Anne Bergeron, Marie-France Sagot
ITNG
2007
IEEE
14 years 1 days ago
Sorting by Block-Interchanges and Signed Reversals
A block-interchange is a rearrangement event that exchanges two, not necessarily consecutive, contiguous regions in a genome, maintaining the original orientation. Signed reversal...
Cleber V. G. Mira, Joao Meidanis
CPM
2004
Springer
107views Combinatorics» more  CPM 2004»
13 years 9 months ago
Sorting by Reversals in Subquadratic Time
The problem of sorting a signed permutation by reversals is inspired by genome rearrangements in computational molecular biology. Given two genomes represented as two signed permut...
Eric Tannier, Marie-France Sagot
RECOMB
2006
Springer
14 years 6 months ago
Sorting by Weighted Reversals, Transpositions, and Inverted Transpositions
Abstract. During evolution, genomes are subject to genome rearrangements that alter the ordering and orientation of genes on the chromosomes. If a genome consists of a single chrom...
Martin Bader, Enno Ohlebusch