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» Two Algorithms for LCS Consecutive Suffix Alignment
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IPL
2008
95views more  IPL 2008»
13 years 5 months ago
Efficient algorithms for finding interleaving relationship between sequences
The longest common subsequence and sequence alignment problems have been studied extensively and they can be regarded as the relationship measurement between sequences. However, m...
Kuo-Si Huang, Chang-Biau Yang, Kuo-Tsung Tseng, Hs...
JCSS
2002
95views more  JCSS 2002»
13 years 5 months ago
Efficient algorithms for locating the length-constrained heaviest segments with applications to biomolecular sequence analysis
We study two fundamental problems concerning the search for interesting regions in sequences: (i) given a sequence of real numbers of length n and an upper bound U; find a consecu...
Yaw-Ling Lin, Tao Jiang, Kun-Mao Chao
APBC
2004
13 years 7 months ago
EMAGEN: An Efficient Approach to Multiple Whole Genome Alignment
Following advances in biotechnology, many new whole genome sequences are becoming available every year. A lot of useful information can be derived from the alignment and compariso...
Jitender S. Deogun, Jingyi Yang, Fangrui Ma
RECOMB
1998
Springer
13 years 10 months ago
Alignments without low-scoring regions
Given a strong match between regions of two sequences, how far can the match be meaningfully extended if gaps are allowed in the resulting alignment? The aim is to avoid searching...
Zheng Zhang 0004, Piotr Berman, Webb Miller
CLEF
2010
Springer
13 years 6 months ago
External and Intrinsic Plagiarism Detection Using a Cross-Lingual Retrieval and Segmentation System - Lab Report for PAN at CLEF
We present our hybrid system for the PAN challenge at CLEF 2010. Our system performs plagiarism detection for translated and non-translated externally as well as intrinsically plag...
Markus Muhr, Roman Kern, Mario Zechner, Michael Gr...