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CIBCB
2007
IEEE
13 years 9 months ago
Genetic Regulatory Network Modeling Using Network Component Analysis and Fuzzy Clustering
Gene regulatory network model is the most widely used mechanism to model and predict the behavior of living organisms. Network Component Analysis (NCA) as an emerging issue for unc...
Fatemeh Bakouie, Mohammad Hassan Moradi
CSB
2005
IEEE
126views Bioinformatics» more  CSB 2005»
13 years 11 months ago
Identifying Simple Discriminatory Gene Vectors with an Information Theory Approach
In the feature selection of cancer classification problems, many existing methods consider genes individually by choosing the top genes which have the most significant signal-to...
Zheng Yun, Kwoh Chee Keong
BMCBI
2004
229views more  BMCBI 2004»
13 years 5 months ago
Automatic annotation of protein motif function with Gene Ontology terms
Background: Conserved protein sequence motifs are short stretches of amino acid sequence patterns that potentially encode the function of proteins. Several sequence pattern search...
Xinghua Lu, Chengxiang Zhai, Vanathi Gopalakrishna...
ICDM
2005
IEEE
215views Data Mining» more  ICDM 2005»
13 years 11 months ago
CLUGO: A Clustering Algorithm for Automated Functional Annotations Based on Gene Ontology
We address the issue of providing highly informative and comprehensive annotations using information revealed by the structured vocabularies of Gene Ontology (GO). For a target, a...
In-Yee Lee, Jan-Ming Ho, Ming-Syan Chen
BMCBI
2006
152views more  BMCBI 2006»
13 years 5 months ago
Amplification of the Gene Ontology annotation of Affymetrix probe sets
Background: The annotations of Affymetrix DNA microarray probe sets with Gene Ontology terms are carefully selected for correctness. This results in very accurate but incomplete a...
Enrique M. Muro, Carolina Perez-Iratxeta, Miguel A...