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SGAI
2007
Springer
13 years 11 months ago
Visualization and Grouping of Graph Patterns in Molecular Databases
Mining subgraphs is an area of research where we have a given set of graphs, and we search for (connected) subgraphs contained in these graphs. In this paper we focus on the analy...
Edgar H. de Graaf, Walter A. Kosters, Joost N. Kok...
BMCBI
2008
83views more  BMCBI 2008»
13 years 5 months ago
Models of deletion for visualizing bacterial variation: an application to tuberculosis spoligotypes
Background: Molecular typing methods are commonly used to study genetic relationships among bacterial isolates. Many of these methods have become standardized and produce portable...
Josephine F. Reyes, Andrew R. Francis, Mark M. Tan...
BMCBI
2008
163views more  BMCBI 2008»
13 years 5 months ago
The Annotation, Mapping, Expression and Network (AMEN) suite of tools for molecular systems biology
Background: High-throughput genome biological experiments yield large and multifaceted datasets that require flexible and user-friendly analysis tools to facilitate their interpre...
Frédéric Chalmel, Michael Primig
ISMB
1993
13 years 6 months ago
Computationally Efficient Cluster Representation in Molecular Sequence Megaclassification
Molecular sequence megaclassification is a technique for automated protein sequence analysis and annotation. Implementation of the method has been limited by the need to store and...
David J. States, Nomi L. Harris, Lawrence Hunter
BMCBI
2004
173views more  BMCBI 2004»
13 years 5 months ago
d-matrix - database exploration, visualization and analysis
Background: Motivated by a biomedical database set up by our group, we aimed to develop a generic database front-end with embedded knowledge discovery and analysis features. A maj...
Dominik Seelow, Raffaello Galli, Siegrun Mebus, Ha...