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NC
2006
149views Neural Networks» more  NC 2006»
13 years 4 months ago
The Construction of Minimal DNA Expressions
Abstract. We describe a formal language/notation for DNA molecules that may contain nicks and gaps. The elements of the language, DNA expressions, denote formal DNA molecules. Diff...
Rudy van Vliet, Hendrik Jan Hoogeboom, Grzegorz Ro...
FCS
2006
13 years 6 months ago
A Procedure for Max-SAT with DNA Strands
Abstract: In recent works for high performance computing, computation with DNA molecules, that is, DNA computing, has had considerable attention as one of non-silicon based computi...
Yuichiro Tokumaru, Akihiro Fujiwara
DNA
2006
Springer
13 years 8 months ago
Hairpin Structures Defined by DNA Trajectories
We examine scattered hairpins, which are structures formed when a single strand of nucleotides folds into a partially hybridized stem and a loop. To specify different classes of h...
Michael Domaratzki
DNA
2006
Springer
143views Bioinformatics» more  DNA 2006»
13 years 6 months ago
A Framework for Modeling DNA Based Molecular Systems
Recent successes in building large scale DNA nanostructures and in constructing DNA nanomechanical devices have inspired scientists to design more complex nanoscale systems. The de...
Sudheer Sahu, Bei Wang, John H. Reif
DAM
2006
106views more  DAM 2006»
13 years 4 months ago
Computational complexity of isothermic DNA sequencing by hybridization
In the paper, the computational complexity of several variants of the problem of isothermic DNA sequencing by hybridization, is analyzed. The isothermic sequencing is a recent met...
Jacek Blazewicz, Marta Kasprzak