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DILS
2008
Springer
13 years 6 months ago
VisGenome and Ensembl: Usability of Integrated Genome Maps
It is not always clear how best to represent integrated data sets, and which application and database features allow a scientist to take best advantage of data coming from various ...
Joanna Jakubowska, Ela Hunt, John McClure, Matthew...
DILS
2008
Springer
13 years 6 months ago
A System for Ontology-Based Annotation of Biomedical Data
Clement Jonquet, Mark A. Musen, Nigam Shah
DILS
2008
Springer
13 years 6 months ago
Data Integration in the Life Sciences: Fun, Findings and Frustrations
This paper concerns the research topic of data integration in the life sciences. The paper presents no technical results, but rather provides a classification of research activitie...
Norman W. Paton
DILS
2007
Springer
13 years 6 months ago
A High-Throughput Bioinformatics Platform for Mass Spectrometry-Based Proteomics
The success of mass spectrometry-based proteomics in emerging applications such as biomarker discovery and clinical diagnostics, is predicated substantially on its ability to achie...
Thodoros Topaloglou, Moyez Dharsee, Rob M. Ewing, ...
DILS
2005
Springer
13 years 7 months ago
Assigning Unique Keys to Chemical Compounds for Data Integration: Some Interesting Counter Examples
Integrating data involving chemical structures is simplified when unique identifiers (UIDs) can be associated with chemical structures. For example, these identifiers can be use...
Greeshma Neglur, Robert L. Grossman, Bing Liu
DILS
2006
Springer
13 years 8 months ago
Link Discovery in Graphs Derived from Biological Databases
Public biological databases contain vast amounts of rich data that can also be used to create and evaluate new biological hypothesis. We propose a method for link discovery in biol...
Petteri Sevon, Lauri Eronen, Petteri Hintsanen, Ki...
DILS
2006
Springer
13 years 8 months ago
Collection-Oriented Scientific Workflows for Integrating and Analyzing Biological Data
Steps in scientific workflows often generate collections of results, causing the data flowing through workflows to become increasingly nested. Because conventional workflow compone...
Timothy M. McPhillips, Shawn Bowers, Bertram Lud&a...
DILS
2006
Springer
13 years 8 months ago
Data Access and Integration in the ISPIDER Proteomics Grid
Abstract. Grid computing has great potential for supporting the integration of complex, fast changing biological data repositories to enable distributed data analysis. One scenario...
Lucas Zamboulis, Hao Fan, Khalid Belhajjame, Jenni...