Sciweavers

CSB
2005
IEEE
119views Bioinformatics» more  CSB 2005»
13 years 11 months ago
Temperature and Mutation Switches in the Secondary Structure of Small RNAs
Conformational switching in the secondary structure of RNAs has recently attracted considerable attention, fostered by the discovery of ‘riboswitches’ in living organisms. The...
Assaf Avihoo, Danny Barash
CSB
2005
IEEE
202views Bioinformatics» more  CSB 2005»
13 years 11 months ago
Head and Neck Cancer Metastasis Prediction via Artificial Neural Networks
Cancers in head and neck tends to spread to nearby lymph nodes. Lymph nodes trap the spreading tumor cells but then the tumor starts to grow in these nodes and then spread further...
Eveleen Darby, Tezeswari Nettimi, Shilpa Kodali, L...
CSB
2005
IEEE
156views Bioinformatics» more  CSB 2005»
13 years 11 months ago
A Robust Meta-classification Strategy for Cancer Diagnosis from Gene Expression Data
One of the major challenges in cancer diagnosis from microarray data is to develop robust classification models which are independent of the analysis techniques used and can combi...
Gabriela Alexe, Gyan Bhanot, Babu Venkataraghavan,...
CSB
2005
IEEE
137views Bioinformatics» more  CSB 2005»
13 years 11 months ago
Improving Operon Prediction in E. coli
In bacterium, genes working in the same pathway or interacting with each other are often organized into operons. Currently, the prediction accuracy for operon/boundary gene pairs ...
PhuongAn Dam, Victor Olman, Ying Xu
CSB
2005
IEEE
130views Bioinformatics» more  CSB 2005»
13 years 11 months ago
Integration of RNA Search methods for Identifying Novel Riboswitch Patterns in Eukaryotes
Riboswitches are RNA genetic control elements that were recently discovered in living cells. To regulate gene expression, they utilize a unique mechanism whereby small molecules b...
Adaya N. Cohen, Klara Kedem, Michal Shapira, Danny...
CSB
2005
IEEE
130views Bioinformatics» more  CSB 2005»
13 years 11 months ago
iSimBioSys: An "In Silico" Discrete Event Simulation Framework for Modeling Biological Systems
The genome projects have provided comprehensive information about the basic building blocks of life. The next challenge is to understand how biological functions emerge from compl...
Samik Ghosh, Preetam Ghosh, Kalyan Basu, Sajal K. ...
BIBE
2005
IEEE
13 years 11 months ago
Using Data Mining Techniques to Learn Layouts of Flat-File Biological Datasets
One of the major problems in biological data integration is that many data sources are stored as flat-files, with a variety of different layouts. Integrating data from such sour...
Kaushik Sinha, Xuan Zhang, Ruoming Jin, Gagan Agra...
BIBE
2005
IEEE
13 years 11 months ago
Improved Phylogenetic Motif Detection Using Parsimony
We have recently demonstrated (La et al, Proteins, 58:2005) that sequence fragments approximating the overall familial phylogeny, called phylogenetic motifs (PMs), represent a pro...
Usman Roshan, Dennis R. Livesay, David La