RECOMB
2004
Springer
14 years 6 months ago
2004
Springer
Abstract. We present an approach to inferring probabilistic models of generegulatory networks that is intended to provide a more mechanistic representation of transcriptional regul...
RECOMB
2004
Springer
14 years 6 months ago
2004
Springer
We present a novel classification-based algorithm called GeneClass for learning to predict gene regulatory response. Our approach is motivated by the hypothesis that in simple orga...
RECOMB
2004
Springer
14 years 6 months ago
2004
Springer
Abstract. In this study we propose a novel model for the representation of biological networks and provide algorithms for learning model parameters from experimental data. Our appr...
RECOMB
2004
Springer
14 years 6 months ago
2004
Springer
RECOMB
2004
Springer
14 years 6 months ago
2004
Springer
An efficient algorithm is presented for detecting approximate tandem repeats in genomic sequences. The algorithm is based on a flexible statistical model which allows a wide range...
RECOMB
2004
Springer
14 years 6 months ago
2004
Springer
RECOMB
2004
Springer
14 years 6 months ago
2004
Springer
We propose a novel, motion planning based approach to approximately map the energy landscape of an RNA molecule. Our method is based on the successful probabilistic roadmap motion...
RECOMB
2004
Springer
14 years 6 months ago
2004
Springer
The challenge of similarity search in massive DNA sequence databases has inspired major changes in BLAST-style alignment tools, which accelerate search by inspecting only pairs of...
RECOMB
2004
Springer
14 years 6 months ago
2004
Springer
Phylogenetic hidden Markov models (phylo-HMMs) have recently been proposed as a means for addressing a multispecies version of the ab initio gene prediction problem. These models ...
RECOMB
2004
Springer
14 years 6 months ago
2004
Springer
Transcriptional regulation is mediated by the coordinated binding of transcription factors to the upstream regions of genes. In higher eukaryotes, the binding sites of cooperating...