8 years 10 months ago
K-SVD for HARDI denoising
Noise is an important concern in high-angular resolution diffusion imaging studies because it can lead to errors in downstream analyses of white matter structure. To address this ...
Vishal Patel, Yonggang Shi, Paul M. Thompson, Arth...
9 years 2 months ago
easyDAS: Automatic creation of DAS servers
Background: The Distributed Annotation System (DAS) has proven to be a successful way to publish and share biological data. Although there are more than 750 active registered serv...
Bernat Gel, Andrew M. Jenkinson, Rafael C. Jimenez...
108views more  JCIT 2008»
9 years 7 months ago
Data Mining for Genetics: A Genetic Algorithm Approach
MINING biological data is an emerging area of intersection between data mining and bioinformatics. Bio-informaticians have been working on the research and development of computat...
G. Madhu, Keshava Reddy
171views more  BMCBI 2008»
9 years 7 months ago
Fuzzy association rules for biological data analysis: A case study on yeast
Background: Last years' mapping of diverse genomes has generated huge amounts of biological data which are currently dispersed through many databases. Integration of the info...
Francisco J. Lopez, Armando Blanco, Fernando Garci...
131views more  BMCBI 2008»
9 years 7 months ago
K-OPLS package: Kernel-based orthogonal projections to latent structures for prediction and interpretation in feature space
Background: Kernel-based classification and regression methods have been successfully applied to modelling a wide variety of biological data. The Kernel-based Orthogonal Projectio...
Max Bylesjö, Mattias Rantalainen, Jeremy K. N...
171views more  BMCBI 2010»
9 years 7 months ago
PyMix - The Python mixture package - a tool for clustering of heterogeneous biological data
Background: Cluster analysis is an important technique for the exploratory analysis of biological data. Such data is often high-dimensional, inherently noisy and contains outliers...
Benjamin Georgi, Ivan Gesteira Costa, Alexander Sc...
120views more  BIODATAMINING 2008»
9 years 7 months ago
Filling the gap between biology and computer science
This editorial introduces BioData Mining, a new journal which publishes research articles related to advances in computational methods and techniques for the extraction of useful ...
Jesús S. Aguilar-Ruiz, Jason H. Moore, Mary...
138views Bioinformatics» more  APBC 2003»
9 years 8 months ago
A New Approach to Protein Structure and Function Analysis Using Semi-structured Databases
The development of high-throughput genome sequencing and protein structure determination techniques have provided researchers with a wealth of biological data. Integrated analysis...
William M. Shui, Raymond K. Wong, Stephen C. Graha...
9 years 9 months ago
A semantic grid-based data access and integration service for bioinformatics
Given the heterogeneous nature of biological data and their intensive use in many tools, in this paper we propose a semantic data access and integration (DAI) service, based on th...
Giovanni Aloisio, Massimo Cafaro, Italo Epicoco, S...
195views Database» more  DASFAA 2010»
9 years 10 months ago
BIDEL: An XML-Based System for Effective Fast Change Detection of Genomic and Proteomic Data
Abstract. A key issue to address in biological data integration is how to detect changes to the underlying biological data sources. In this demonstration, we present a novel system...
Song Yang, Sourav S. Bhowmick