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    BMCBI
    2008
    85views more  BMCBI 2008»
    Normalizing biomedical terms by minimizing ambiguity and variability
    13 years 5 months ago
    Normalizing biomedical terms by minimizing ambiguity and variability
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    Background: One of the difficulties in mapping biomedical named entities, e.g. genes, proteins, chemicals and diseases, to their concept identifiers stems from the potential varia...
    Yoshimasa Tsuruoka, John McNaught, Sophia Ananiado...
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    BMCBI
    2008
    141views more  BMCBI 2008»
    Ontology-guided data preparation for discovering genotype-phenotype relationships
    13 years 5 months ago
    Ontology-guided data preparation for discovering genotype-phenotype relationships
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    Complexity of post-genomic data and multiplicity of mining strategies are two limits to Knowledge Discovery in Databases (KDD) in life sciences. Because they provide a semantic fr...
    Adrien Coulet, Malika Smaïl-Tabbone, Pascale ...
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    BMCBI
    2008
    66views more  BMCBI 2008»
    FunClust: a web server for the identification of structural motifs in a set of non-homologous protein structures
    13 years 5 months ago
    FunClust: a web server for the identification of structural motifs in a set of non-homologous protein structures
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    Gabriele Ausiello, Pier Federico Gherardini, Paolo...
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    BMCBI
    2008
    50views more  BMCBI 2008»
    Using a kernel density estimation based classifier to predict species-specific microRNA precursors
    13 years 5 months ago
    Using a kernel density estimation based classifier to predict species-specific microRNA precursors
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    Darby Tien-Hao Chang, Chih-Ching Wang, Jian-Wei Ch...
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    BMCBI
    2008
    158views more  BMCBI 2008»
    Metrics for GO based protein semantic similarity: a systematic evaluation
    13 years 5 months ago
    Metrics for GO based protein semantic similarity: a systematic evaluation
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    Background: Several semantic similarity measures have been applied to gene products annotated with Gene Ontology terms, providing a basis for their functional comparison. However,...
    Catia Pesquita, Daniel Faria, Hugo P. Bastos, Ant&...
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    BMCBI
    2008
    184views more  BMCBI 2008»
    Integrating protein-protein interactions and text mining for protein function prediction
    13 years 5 months ago
    Integrating protein-protein interactions and text mining for protein function prediction
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    Background: Functional annotation of proteins remains a challenging task. Currently the scientific literature serves as the main source for yet uncurated functional annotations, b...
    Samira Jaeger, Sylvain Gaudan, Ulf Leser, Dietrich...
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    BMCBI
    2008
    208views more  BMCBI 2008»
    GraphFind: enhancing graph searching by low support data mining techniques
    13 years 5 months ago
    GraphFind: enhancing graph searching by low support data mining techniques
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    Background: Biomedical and chemical databases are large and rapidly growing in size. Graphs naturally model such kinds of data. To fully exploit the wealth of information in these...
    Alfredo Ferro, Rosalba Giugno, Misael Mongiov&igra...
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    BMCBI
    2008
    93views more  BMCBI 2008»
    Ranking single nucleotide polymorphisms by potential deleterious effects
    13 years 5 months ago
    Ranking single nucleotide polymorphisms by potential deleterious effects
    Download  www.eecis.udel.edu
    Identifying single nucleotide polymorphisms (SNPs) that are responsible for common and complex diseases such as cancer is of major interest in current molecular epidemiology. Howe...
    Phil Hyoun Lee, Hagit Shatkay
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    BMCBI
    2008
    119views more  BMCBI 2008»
    On deducing causality in metabolic networks
    13 years 5 months ago
    On deducing causality in metabolic networks
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    Background: Metabolic networks present a complex interconnected structure, whose understanding is in general a non-trivial task. Several formal approaches have been developed to s...
    Chiara Bodei, Andrea Bracciali, Davide Chiarugi
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    BMCBI
    2008
    66views more  BMCBI 2008»
    Modelling the structures of G protein-coupled receptors aided by three-dimensional validation
    13 years 5 months ago
    Modelling the structures of G protein-coupled receptors aided by three-dimensional validation
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    Siavoush Dastmalchi, W. Bret Church, Michael B. Mo...
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