Sciweavers

CIBCB
2005
IEEE
13 years 10 months ago
An Internet-based Melanoma Diagnostic System - Toward the Practical Application
— In this paper, we report a practical application of world’s first internet-based melanoma diagnostic system. The system is now available from all over the world, 24 hours 36...
Hitoshi Iyatomi, Hiroshi Oka, Masahiro Hashimoto, ...
CIBCB
2005
IEEE
13 years 10 months ago
Predicting Peroxisomal Proteins
— PTS1 proteins are peroxisomal matrix proteins that have a well conserved targeting motif at the C-terminal end. However, this motif is present in many non peroxisomal proteins ...
John Hawkins, Mikael Bodén
CIBCB
2005
IEEE
13 years 10 months ago
Toward Protein Structure Analysis with Self-Organizing Maps
- Establishing structure-function relationships on the proteomic scale is a unique challenge faced by bioinformatics and molecular biosciences. Large protein families represent nat...
Lutz Hamel, Gongqin Sun, Jing Zhang
CIBCB
2005
IEEE
13 years 10 months ago
Network Motifs, Feedback Loops and the Dynamics of Genetic Regulatory Networks
We analyse a suite of Boolean networks which have been evolved to exhibit limit cycle-type dynamics in terms of the distribution of small network motifs and feedback loops. We find...
Jennifer Hallinan, Paul T. Jackway
CIBCB
2005
IEEE
13 years 10 months ago
Segment and Combine Approach for Biological Sequence Classification
Pierre Geurts, Antia Blanco Cuesta, Louis Wehenkel
CIBCB
2005
IEEE
13 years 10 months ago
The Homology Kernel: A Biologically Motivated Sequence Embedding into Euclidean Space
— Part of the challenge of modeling protein sequences is their discrete nature. Many of the most powerful statistical and learning techniques are applicable to points in a Euclid...
Eleazar Eskin, Sagi Snir
CIBCB
2005
IEEE
13 years 10 months ago
Intrinsic Disorder and Protein modifications: Building an SVM Predictor for Methylation
Abstract-Post-translational protein modifications play an important role in many protein pathways and interactions. It has been hypothesized that modifications to proteins occur in...
Kenneth Daily, Predrag Radivojac, A. Keith Dunker
CIBCB
2005
IEEE
13 years 10 months ago
Identification of Functional RNA Genes Using Evolved Neural Networks
Functional RNAs (fRNAs) play a key role in gene regulation, at both the transcriptional and translational levels. Identification of fRNA genes can be difficult, given that some cla...
Mars Cheung, Gary B. Fogel
CIBCB
2005
IEEE
13 years 10 months ago
Heuristic Algorithm for Computing Reversal Distance with MultiGene Families via Binary Integer Programming
— Hannenhalli and Pevzner developed the first polynomial-time algorithm for the combinatorial problem of sorting of signed genomic data. Their algorithm solves the minimum numbe...
Jakkarin Suksawatchon, Chidchanok Lursinsap, Mikae...
CIBCB
2005
IEEE
13 years 10 months ago
A Neural Network for Predicting Protein Disorder using Amino Acid Hydropathy Values
— Proteins have been discovered to contain ordered regions and disordered regions, where ordered regions have a defined three-dimensional (3D) structure and disordered regions d...
Deborah Stoffer, L. Gwenn Volkert