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RECOMB
2005
Springer
14 years 5 months ago
Peptide Sequence Tags for Fast Database Search in Mass-Spectrometry
Ari Frank, Stephen Tanner, Pavel A. Pevzner
RECOMB
2005
Springer
14 years 5 months ago
Towards an Integrated Protein-Protein Interaction Network
Abstract. Protein-protein interactions play a major role in most cellular processes. Thus, the challenge of identifying the full repertoire of interacting proteins in the cell is o...
Ariel Jaimovich, Gal Elidan, Hanah Margalit, Nir F...
RECOMB
2005
Springer
14 years 5 months ago
Constructing a Smallest Refining Galled Phylogenetic Network
Reticulation events occur frequently in many types of species. Therefore, to develop accurate methods for reconstructing phylogenetic networks in order to describe evolutionary his...
Trinh N. D. Huynh, Jesper Jansson, Nguyen Bao Nguy...
RECOMB
2005
Springer
14 years 5 months ago
Reconstruction of Reticulate Networks from Gene Trees
Abstract. One of the simplest evolutionary models has molecular sequences evolving from a common ancestor down a bifurcating phylogenetic tree, experiencing point-mutations along t...
Daniel H. Huson, Tobias H. Klöpper, Pete J. L...
RECOMB
2005
Springer
14 years 5 months ago
A Hybrid Micro-Macroevolutionary Approach to Gene Tree Reconstruction
Dannie Durand, Bjarni V. Halldórsson, Benja...
RECOMB
2005
Springer
14 years 5 months ago
Rapid Protein Side-Chain Packing via Tree Decomposition
This paper proposes a novel tree decomposition based side-chain assignment algorithm, which can obtain the globally optimal solution of the side-chain packing problem very efficien...
Jinbo Xu
RECOMB
2005
Springer
14 years 5 months ago
Avoiding Local Optima in Single Particle Reconstruction
In single-particle reconstruction, a 3D structure is reconstructed from a large number of randomly oriented 2D projections, using techniques related to computed tomography. Unlike ...
Marshall W. Bern, Jindong Chen, Hao Chi Wong
RECOMB
2005
Springer
14 years 5 months ago
Maximum Likelihood of Evolutionary Trees Is Hard
Benny Chor, Tamir Tuller
RECOMB
2005
Springer
14 years 5 months ago
On Sorting by Translocations
The study of genome rearrangements is an important tool in comparative genomics. This paper revisits the problem of sorting a multichromosomal genome by translocations, i.e. exchan...
Anne Bergeron, Julia Mixtacki, Jens Stoye