BIOCOMP
2009
2009
Improving Remote Homology Detection Using Sequence Properties and Position Specific Scoring Matrices
13 years 10 months ago
Current biological sequence comparison tools frequently fail to recognize matches between homologs when sequence similarity is below the twilight zone of less than 25% sequence id...
ISMB
1993
13 years 10 months ago
1993
The minimal-length encoding approach is applied to define concept of sequence similarity. Asequence is defined to be similar to another sequence or to a set of keywords if it can ...
VISUALIZATION
1995
IEEE
14 years 26 days ago
1995
IEEE
Biological sequence similarity analysis presents visualization challenges, primarily because of the massive amounts of discrete, multi-dimensional data. Genomic data generated by ...
FSTTCS
2003
Springer
14 years 2 months ago
2003
Springer
Computational genomics involves comparing sequences based on “similarity” for detecting evolutionary and functional relationships. Until very recently, available portions of th...
SAC
2003
ACM
14 years 2 months ago
2003
ACM
Existing sequence comparison software applications lack automation, abstraction, performance, and flexibility. Users need a new way of studying and applying sequence comparisons i...
CIKM
2005
Springer
14 years 2 months ago
2005
Springer
Many bioinformatics applications would benefit from comparing proteins based on their biological role rather than their sequence. In most biological databases, proteins are alrea...