Free Online Productivity Tools
i2Speak
i2Symbol
i2OCR
iTex2Img
iWeb2Print
iWeb2Shot
i2Type
iPdf2Split
iPdf2Merge
i2Bopomofo
i2Arabic
i2Style
i2Image
i2PDF
iLatex2Rtf
Sci2ools
BMCBI
2004
2004
Analysis of superfamily specific profile-profile recognition accuracy
Background: Annotation of sequences that share little similarity to sequences of known function remains a major obstacle in genome annotation. Some of the best methods of detecting remote relationships between protein sequences are based on matching sequence profiles. We analyse the superfamily specific performance of sequence profile-profile matching. Our benchmark consists of a set of 16 protein superfamilies that are highly diverse at the sequence level. We relate the performance to the number of sequences in the profiles, the profile diversity and the extent of structural conservation in the superfamily. Results: The performance varies greatly between superfamilies with the truncated receiver
Real-time TrafficRelated Content
| Added | 16 Dec 2010 |
| Updated | 16 Dec 2010 |
| Type | Journal |
| Year | 2004 |
| Where | BMCBI |
| Authors | James A. Casbon, Mansoor A. S. Saqi |
Comments (0)
Researcher Info
|
