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18

ISBRA
2009
Springer

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Querying Protein-Protein Interaction Networks

13 years 11 months ago

Querying Protein-Protein Interaction Networks

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Recent techniques increase the amount of our knowledge of interactions between proteins. To ﬁlter, interpret and organize this data, many authors have provided tools for querying patterns in the shape of paths or trees in Protein-Protein Interaction networks. In this paper, we propose an exact algorithm for querying graphs pattern based on dynamic programming and color-coding. We provide an implementation which has been validated on real data.

Guillaume Blin, Florian Sikora, Stéphane Vi

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Bioinformatics | Dynamic Programming | Exact Algorithm | ISBRA 2009 | Protein-protein Interaction Networks |

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Added	20 May 2010
Updated	20 May 2010
Type	Conference
Year	2009
Where	ISBRA
Authors	Guillaume Blin, Florian Sikora, Stéphane Vialette

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