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BIBE
2015
IEEE
2 years 11 months ago
Application of smoothed particle hydrodynamics in biomechanics: Advanced procedure for discretization of complex biological shap
— Smoothed Particle Hydrodynamics is meshless numerical method which is based on continuum mechanics approach, capable of analyzing stresses in both solids and fluids as well as ...
BIBE
2015
IEEE
2 years 11 months ago
Semi-automatic scoring tool for comet assay
Comet assay or single-cell gel electrophoresis is a widely used method for DNA damage assessment. The results of the method can be scored under microscopic examination either with...
BIBE
2015
IEEE
2 years 11 months ago
Security of mobile health (mHealth) systems
- mHealth is a growing field that enables individuals to monitor their health status and facilitates the sharing of medical records with physicians and between hospitals anytime an...
WOB
2013
251views Bioinformatics» more  WOB 2013»
3 years 10 months ago
The Trouble with Long-Range Base Pairs in RNA Folding
RNA prediction has long been struggling with long-range base pairs since prediction accuracy decreases with base pair span. We analyze here the empirical distribution of base pair ...
Fabian Amman, Stephan H. F. Bernhart, Gero Doose, ...
BCB
2013
107views Bioinformatics» more  BCB 2013»
4 years 11 months ago
PReach: Reachability in Probabilistic Signaling Networks
Extracellular molecules trigger a response inside the cell by initiating a signal at special membrane receptors (i.e., sources) which is then transmitted to reporters (i.e., target...
Haitham Gabr, Andrei Todor, Helia Zandi, Alin Dobr...

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Yi XianfuLecturer
TIJMU
Yi Xianfu
DNA
2011
Springer
233views Bioinformatics» more  DNA 2011»
7 years 3 months ago
Less Haste, Less Waste: On Recycling and Its Limits in Strand Displacement Systems
We study the potential for molecule recycling in chemical reaction systems and their DNA strand displacement realizations. Recycling happens when a product of one reaction is a rea...
Anne Condon, Alan J. Hu, Ján Manuch, Chris ...
DNA
2011
Springer
227views Bioinformatics» more  DNA 2011»
7 years 3 months ago
Cooperative Assembly Systems
Several molecular systems form large-scale objects. One would like to understand their assembly and how this assembly is regulated. As a first step, we investigate the phase trans...
Vincent Danos, Heinz Koeppl, John Wilson-Kanamori
DNA
2011
Springer
213views Bioinformatics» more  DNA 2011»
7 years 3 months ago
Graph-Theoretic Formalization of Hybridization in DNA Sticker Complexes
Sticker complexes are a a formal graph-based data model for a restricted class of DNA complexes, motivated by potential applications to databases. This data model allows for a pure...
Robert Brijder, Joris J. M. Gillis, Jan Van den Bu...
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