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BCB
2010
489views Bioinformatics» more  BCB 2010»
12 years 12 months ago
ReFHap: a reliable and fast algorithm for single individual haplotyping
Jorge Duitama, Thomas Huebsch, Gayle McEwen, Eun-K...
BIOCOMP
2010
13 years 2 months ago
A Model Reduction Technique for Stochastic Biochemical Kinetics
Abstract-- Modeling the intermolecular reactions in a single cell is a critical problem in computational biology. Biochemical reaction systems often involve species in both low and...
Silvana Ilie, Ekaterina Kudashkina
BIBM
2010
IEEE
286views Bioinformatics» more  BIBM 2010»
13 years 2 months ago
Evaluation of short read metagenomic assembly
Advances in sequencing technologies have equipped researchers with the ability to sequence the collective genome of entire microbial communities commonly referred to as metagenomi...
Anveshi Charuvaka, Huzefa Rangwala
BIBM
2010
IEEE
277views Bioinformatics» more  BIBM 2010»
13 years 2 months ago
Accurate prediction of ATP-binding residues using sequence and sequence-derived structural descriptors
ATP is a ubiquitous nucleotide that provides energy for cellular activities, catalyzes chemical reactions, and is involved in cellular signaling. The knowledge of the ATPprotein in...
Ke Chen 0003, Marcin J. Mizianty, Lukasz A. Kurgan
ISBRA
2010
Springer
13 years 3 months ago
Analysis of Gene Interactions Using Restricted Boolean Networks and Time-Series Data
A popular model for gene regulatory networks is the Boolean network model. In this paper, we propose an algorithm to perform an analysis of gene regulatory interactions using the B...
Carlos H. A. Higa, Vitor H. P. Louzada, Ronaldo Fu...
Bioinformatics
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