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BIBE
2005
IEEE
154views Bioinformatics» more  BIBE 2005»
13 years 11 months ago
Effective Pre-Processing Strategies for Functional Clustering of a Protein-Protein Interactions Network
In this article we present novel preprocessing techniques, based on topological measures of the network, to identify clusters of proteins from Protein-protein interaction (PPI) ne...
Duygu Ucar, Srinivasan Parthasarathy, Sitaram Asur...
JCB
2006
129views more  JCB 2006»
13 years 5 months ago
Towards an Integrated Protein-Protein Interaction Network: A Relational Markov Network Approach
Protein
Ariel Jaimovich, Gal Elidan, Hanah Margalit, Nir F...
ISBRA
2009
Springer
14 years 2 days ago
Querying Protein-Protein Interaction Networks
Recent techniques increase the amount of our knowledge of interactions between proteins. To filter, interpret and organize this data, many authors have provided tools for querying...
Guillaume Blin, Florian Sikora, Stéphane Vi...
TCBB
2010
144views more  TCBB 2010»
13 years 10 hour ago
Querying Graphs in Protein-Protein Interactions Networks Using Feedback Vertex Set
Recent techniques increase rapidly the amount of our knowledge on interactions between proteins. The interpretation of these new information depends on our ability to retrieve kno...
Guillaume Blin, Florian Sikora, Stéphane Vi...
BIBM
2008
IEEE
141views Bioinformatics» more  BIBM 2008»
13 years 11 months ago
Protein-Protein Interaction Network Alignment by Quantitative Simulation
We adapt a network simulation algorithm called quantitative simulation (QSim) for use in the alignment of biological networks. Unlike most network alignment methods, QSim finds l...
Perry Evans, Ted Sandler, Lyle H. Ungar