33 search results - page 2 / 7 » A survey of DNA motif finding algorithms |
CSB
2003
IEEE
13 years 10 months ago
2003
IEEE
Codon optimization enhances the efficiency of DNA expression vectors used in DNA vaccination and gene therapy by increasing protein expression. Additionally, certain nucleotide mo...
RECOMB
2001
Springer
14 years 5 months ago
2001
Springer
motif discovery problem abstracts the task of discovering short, conserved sites in genomic DNA. Pevzner and Sze recently described a precise combinatorial formulation of motif di...
EVOW
2010
Springer
13 years 3 months ago
2010
Springer
Background: Identifying approximately repeated patterns, or motifs, in DNA sequences from a set of co-regulated genes is an important step towards deciphering the complex gene reg...
BMCBI
2007
13 years 5 months ago
2007
Background: Finding over- or under-represented motifs in biological sequences is now a common task in genomics. Thanks to p-value calculation for motif counts, exceptional motifs ...
BMCBI
2007
13 years 5 months ago
2007
Over the last two decades a large number of algorithms has been developed for regulatory motif finding. Here we show how many of these algorithms, especially those that model bind...