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GEOS
2007
Springer
13 years 10 months ago
Structure-Based Methods to Enhance Geospatial Ontology Alignment
In geospatial applications with heterogeneous classification schemes that describe related domains, an ontology-driven approach to data sharing and interoperability relies on the ...
William Sunna, Isabel F. Cruz
ISMB
1997
13 years 6 months ago
Increasing Consensus Accuracy in DNA Fragment Assemblies by Incorporating Fluorescent Trace Representations
We present a new method for determining the consensus sequence in DNA fragment assemblies. The new method, Trace-Evidence, directly incorporates aligned ABI trace information into...
Carolyn F. Allex, Schuyler F. Baldwin, Jude W. Sha...
BMCBI
2005
93views more  BMCBI 2005»
13 years 4 months ago
Multiple sequence alignment accuracy and evolutionary distance estimation
Background: Sequence alignment is a common tool in bioinformatics and comparative genomics. It is generally assumed that multiple sequence alignment yields better results than pai...
Michael S. Rosenberg
CORR
2006
Springer
121views Education» more  CORR 2006»
13 years 4 months ago
Number sequence representation of protein structures based on the second derivative of a folded tetrahedron sequence
A protein is a sequence of amino-acids of length typically less than 1, 000, where there are 20 kinds of amino-acids. In nature, each protein is folded into a well-defined three-d...
Naoto Morikawa
NAR
2010
140views more  NAR 2010»
12 years 11 months ago
GUIDANCE: a web server for assessing alignment confidence scores
Evaluating the accuracy of multiple sequence alignment (MSA) is critical for virtually every comparative sequence analysis that uses an MSA as input. Here we present the GUIDANCE ...
Osnat Penn, Eyal Privman, Haim Ashkenazy, Giddy La...