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ASAP
2010
IEEE
128views Hardware» more  ASAP 2010»
13 years 6 months ago
An optimized NoC architecture for accelerating TSP kernels in breakpoint median problem
Turbo Majumder, Souradip Sarkar, Partha Pande, Ana...
TVLSI
2008
90views more  TVLSI 2008»
13 years 5 months ago
A Special-Purpose Architecture for Solving the Breakpoint Median Problem
Abstract--In this paper, we describe the design for a co-processor for whole-genome phylogenetic reconstruction. Our current design performs a parallelized breakpoint median comput...
Jason D. Bakos, Panormitis E. Elenis
BIBE
2007
IEEE
126views Bioinformatics» more  BIBE 2007»
13 years 7 months ago
FPGA Acceleration of Phylogeny Reconstruction for Whole Genome Data
In this paper we describe our design and characterization of a co-processor architecture to accelerate median-based phylogenetic reconstruction for generearrangement data. Our curr...
Jason D. Bakos, Panormitis E. Elenis, Jijun Tang