143 search results - page 1 / 29 » Compiled hardware acceleration of Molecular Dynamics code |
FPL
2008
Springer
13 years 7 months ago
2008
Springer
The objective of Molecular Dynamics (MD) simulations is to determine the shape of a molecule in a given biomolecular environment. These simulations are very demanding computationa...
FCCM
2006
IEEE
13 years 11 months ago
2006
IEEE
: We describe a new pipeline for computing non-bonded forces and its integration into the ProtoMol molecular dynamics (MD) code. There are several innovations: a novel interpolatio...
FPL
2006
Springer
13 years 9 months ago
2006
Springer
: FPGA-based acceleration of molecular dynamics (MD) has been the subject of several recent studies. Here we describe a new non-bonded force computation pipeline implemented on a 2...
FPL
2009
Springer
13 years 8 months ago
2009
Springer
The acceleration of molecular dynamics (MD) simulations using high performance reconfigurable computing (HPRC) has been much studied. Given the intense competition from multicore...
FCCM
2007
IEEE
13 years 11 months ago
2007
IEEE
Abstract: FPGA-based acceleration of molecular dynamics (MD) has been the subject of several recent studies. Implementing long-range forces, however, has only recently been address...