114 search results - page 2 / 23 » Convergent algorithms for protein structural alignment |
AINA
2008
IEEE
13 years 11 months ago
2008
IEEE
We introduce a method for comparing protein structures using the notion of residue contexts based on protein Cα-atom backbones. The residue context is derived from the set of vec...
BIBE
2007
IEEE
13 years 5 months ago
2007
IEEE
While much research has been done on finding similarities between protein sequences, there has not been the same progress on finding similarities between protein structures. Here ...
ISMB
1997
13 years 6 months ago
1997
The structural comparison of proteins has become increasingly important as a means to identify protein motifs and fold families. In this paper we present a new algorithm for the c...
RECOMB
2006
Springer
14 years 5 months ago
2006
Springer
This paper proposes a parameterized algorithm for aligning two protein structures, in the case where one protein structure is represented by a contact map graph and the other by a ...
BMCBI
2005
13 years 5 months ago
2005
Background: We introduce GASH, a new, publicly accessible program for structural alignment and superposition. Alignments are scored by the Number of Equivalent Residues (NER), a q...