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» Efficient Haplotype Inference with Answer Set Programming
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AAAI
2008
13 years 6 months ago
Efficient Haplotype Inference with Answer Set Programming
Identifying maternal and paternal inheritance is essential to be able to find the set of genes responsible for a particular disease. Although we have access to genotype data (gene...
Esra Erdem, Ferhan Türe
LPNMR
2009
Springer
13 years 9 months ago
HAPLO-ASP: Haplotype Inference Using Answer Set Programming
Identifying maternal and paternal inheritance is essential to be able to find the set of genes responsible for a particular disease. However, due to technological limitations, we ...
Esra Erdem, Ozan Erdem, Ferhan Türe
WABI
2004
Springer
142views Bioinformatics» more  WABI 2004»
13 years 9 months ago
Linear Reduction for Haplotype Inference
Abstract. Haplotype inference problem asks for a set of haplotypes explaining a given set of genotypes. Popular software tools for haplotype inference (e.g., PHASE, HAPLOTYPER) as ...
Jingwu He, Alexander Zelikovsky
AAAI
2006
13 years 5 months ago
Efficient Haplotype Inference with Boolean Satisfiability
One of the main topics of research in genomics is determining the relevance of mutations, described in haplotype data, as causes of some genetic diseases. However, due to technolo...
Inês Lynce, João Marques-Silva
CPAIOR
2008
Springer
13 years 6 months ago
Efficient Haplotype Inference with Combined CP and OR Techniques
Abstract. Haplotype inference has relevant biological applications, and represents a challenging computational problem. Among others, pure parsimony provides a viable modeling appr...
Ana Graça, João Marques-Silva, In&ec...