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EPIA
2007
Springer
13 years 10 months ago
Evaluating Simulated Annealing Algorithms in the Optimization of Bacterial Strains
Abstract. In this work, a Simulated Annealing (SA) algorithm is proposed for a Metabolic Engineering task: the optimization of the set of gene deletions to apply to a microbial str...
Miguel Rocha, Rui Mendes, Paulo Maia, José ...
CIBCB
2007
IEEE
13 years 6 months ago
Optimization of Bacterial Strains with Variable-Sized Evolutionary Algorithms
—In metabolic engineering it is difficult to identify which set of genetic manipulations will result in a microbial strain that achieves a desired production goal, due to the co...
Miguel Rocha, José P. Pinto, Isabel Rocha, ...
CEC
2008
IEEE
13 years 11 months ago
A Fast Bacterial Swarming Algorithm for high-dimensional function optimization
—A novel Fast Bacterial Swarming Algorithm (FBSA) for high-dimensional function optimization is presented in this paper. The proposed algorithm combines the foraging mechanism of...
Ying Chu, Hua Mi, Huilian Liao, Zhen Ji, Q. H. Wu
BMCBI
2008
179views more  BMCBI 2008»
13 years 4 months ago
Bayesian modeling of recombination events in bacterial populations
Background: We consider the discovery of recombinant segments jointly with their origins within multilocus DNA sequences from bacteria representing heterogeneous populations of fa...
Pekka Marttinen, Adam Baldwin, William P. Hanage, ...
IPPS
1998
IEEE
13 years 9 months ago
Meta-heuristics for Circuit Partitioning in Parallel Test Generation
In this communication Simulated Annealing and Genetic Algorithms, are applied to the graph partitioning problem. These techniques mimic processes in statistical mechanics and biol...
Consolación Gil, Julio Ortega, Antonio F. D...