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BIBM
2008
IEEE
112views Bioinformatics» more  BIBM 2008»
13 years 11 months ago
Fast Alignments of Metabolic Networks
Network alignments are extensively used for comparing, exploring, and predicting biological networks. Existing alignment tools are mostly based on isomorphic and homeomorphic embe...
Qiong Cheng, Piotr Berman, Robert W. Harrison, Ale...
BIBE
2007
IEEE
145views Bioinformatics» more  BIBE 2007»
13 years 11 months ago
Homomorphisms of Multisource Trees into Networks with Applications to Metabolic Pathways
Network mapping is a convenient tool for comparing and exploring biological networks; it can be used for predicting unknown pathways, fast and meaningful searching of databases, a...
Qiong Cheng, Robert W. Harrison, Alexander Zelikov...
CEAS
2007
Springer
13 years 9 months ago
Learning Fast Classifiers for Image Spam
Recently, spammers have proliferated "image spam", emails which contain the text of the spam message in a human readable image instead of the message body, making detect...
Mark Dredze, Reuven Gevaryahu, Ari Elias-Bachrach
BMCBI
2008
114views more  BMCBI 2008»
13 years 5 months ago
Dinucleotide controlled null models for comparative RNA gene prediction
Background: Comparative prediction of RNA structures can be used to identify functional noncoding RNAs in genomic screens. It was shown recently by Babak et al. [BMC Bioinformatic...
Tanja Gesell, Stefan Washietl
LION
2009
Springer
135views Optimization» more  LION 2009»
13 years 12 months ago
Neural Network Pairwise Interaction Fields for Protein Model Quality Assessment
We present a new knowledge-based Model Quality Assessment Program (MQAP) at the residue level which evaluates single protein structure models. We use a tree representation of the ...
Alberto J. M. Martin, Alessandro Vullo, Gianluca P...