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MICS
2010
137views more  MICS 2010»
13 years 3 months ago
Finding Range Minima in the Middle: Approximations and Applications
Abstract. A Range Minimum Query asks for the position of a minimal element between two specified array-indices. We consider a natural extension of this, where our further constrai...
Johannes Fischer, Volker Heun
RECOMB
2004
Springer
14 years 5 months ago
Finding approximate tandem repeats in genomic sequences
An efficient algorithm is presented for detecting approximate tandem repeats in genomic sequences. The algorithm is based on a flexible statistical model which allows a wide range...
Ydo Wexler, Zohar Yakhini, Yechezkel Kashi, Dan Ge...
RECOMB
2001
Springer
14 years 5 months ago
Applications of generalized pair hidden Markov models to alignment and gene finding problems
Hidden Markov models (HMMs) have been successfully applied to a variety of problems in molecular biology, ranging from alignment problems to gene nding and annotation. Alignment p...
Lior Pachter, Marina Alexandersson, Simon Cawley
VLDB
2005
ACM
149views Database» more  VLDB 2005»
14 years 5 months ago
Selectivity estimators for multidimensional range queries over real attributes
Estimating the selectivity of multidimensional range queries over real valued attributes has significant applications in data exploration and database query optimization. In this p...
Dimitrios Gunopulos, George Kollios, Vassilis J. T...
SODA
2010
ACM
202views Algorithms» more  SODA 2010»
14 years 2 months ago
Counting Inversions, Offline Orthogonal Range Counting, and Related Problems
We give an O(n lg n)-time algorithm for counting the number of inversions in a permutation on n elements. This improves a long-standing previous bound of O(n lg n/ lg lg n) that ...
Timothy M. Chan, Mihai Patrascu