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NAR
2008
90views more  NAR 2008»
13 years 6 months ago
Many Microbe Microarrays Database: uniformly normalized Affymetrix compendia with structured experimental metadata
Many Microbe Microarrays Database (M3D ) is designed to facilitate the analysis and visualization of expression data in compendia compiled from multiple laboratories. M3D contains...
Jeremiah J. Faith, Michael E. Driscoll, Vincent A....
BMCBI
2008
82views more  BMCBI 2008»
13 years 6 months ago
Standardized high-throughput evaluation of cell-based compound screens
Background: High-throughput screening of pharmaceutical compound activity in tissue culture experiments requires time-consuming repeated analysis of the large amounts of data gene...
Peter Frommolt, Roman K. Thomas
WSC
2008
13 years 8 months ago
Introducing age-based parameters into simulations of crowd dymanics
Very few crowds consist of individuals who are exactly the same. Defining variables, such as age, and how they affect an individual's movement, could increase realism in simu...
D. J. Kaup, Thomas L. Clarke, Rex Oleson, Linda C....
AAAI
1998
13 years 7 months ago
An Architecture for Exploring Large Design Spaces
We describe an architecture for exploring very large design spaces, for example, spaces that arise when design candidates are generated by combining components systematically from...
John R. Josephson, B. Chandrasekaran, Mark Carroll...
BIBM
2009
IEEE
155views Bioinformatics» more  BIBM 2009»
14 years 29 days ago
Towards Reliable Isoform Quantification Using RNA-Seq Data
Background: In eukaryotes, alternative splicing often generates multiple splice variants from a single gene. Here weexplore the use of RNA sequencing (RNA-Seq) datasets to address...
Brian E. Howard, Steffen Heber