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» Locating a Tree in a Phylogenetic Network in Quadratic Time
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APBC
2004
132views Bioinformatics» more  APBC 2004»
13 years 6 months ago
Identifying Character Non-Independence in Phylogenetic Data Using Data Mining Techniques
Undiscovered relationships in a data set may confound analyses, particularly those that assume data independence. Such problems occur when characters used for phylogenetic analyse...
Anne M. Maglia, Jennifer L. Leopold, Venkat Ram Gh...
BMCBI
2006
127views more  BMCBI 2006»
13 years 5 months ago
Construction of phylogenetic trees by kernel-based comparative analysis of metabolic networks
Background: To infer the tree of life requires knowledge of the common characteristics of each species descended from a common ancestor as the measuring criteria and a method to c...
Sok June Oh, Je-Gun Joung, Jeong Ho Chang, Byoung-...
IPPS
1998
IEEE
13 years 9 months ago
Optimally Locating a Structured Facility of a Specified Length in a Weighted Tree Network
including the one proposed in [5]. Minieka showed that all the eight problems can be solved in polynomial time except the one of finding the maximum distancesum tree of a specified...
Shan-Chyun Ku, Biing-Feng Wang
DISOPT
2011
201views Education» more  DISOPT 2011»
12 years 8 months ago
The Wiener maximum quadratic assignment problem
We investigate a special case of the maximum quadratic assignment problem where one matrix is a product matrix and the other matrix is the distance matrix of a one-dimensional poi...
Eranda Çela, Nina S. Schmuck, Shmuel Wimer,...
RECOMB
2008
Springer
14 years 5 months ago
Integrating Sequence and Topology for Efficient and Accurate Detection of Horizontal Gene Transfer
Abstract. One phylogeny-based approach to horizontal gene transfer (HGT) detection entails comparing the topology of a gene tree to that of the species tree, and using their differ...
Cuong Than, Guohua Jin, Luay Nakhleh