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» PIDD: database for Protein Inter-atomic Distance Distributio...
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NAR
2007
50views more  NAR 2007»
13 years 4 months ago
PIDD: database for Protein Inter-atomic Distance Distributions
Di Wu, Feng Cui, Robert L. Jernigan, Zhijun Wu
ER
2007
Springer
150views Database» more  ER 2007»
13 years 11 months ago
2D Visualisation of SMFS Data on Membrane Proteins
Misfolding of membrane proteins plays an important role in many human diseases such as retinitis pigmentosa, heredity deafness and diabetes insipidus. Single molecule force spectr...
Annalisa Marsico, Kerstin Vanselow, Jing Wang, Dir...
CSB
2005
IEEE
125views Bioinformatics» more  CSB 2005»
13 years 10 months ago
On Optimizing Distance-Based Similarity Search for Biological Databases
Similarity search leveraging distance-based index structures is increasingly being used for both multimedia and biological database applications. We consider distance-based indexi...
Rui Mao, Weijia Xu, Smriti R. Ramakrishnan, Glen N...
RECOMB
2004
Springer
14 years 5 months ago
Mining protein family specific residue packing patterns from protein structure graphs
Finding recurring residue packing patterns, or spatial motifs, that characterize protein structural families is an important problem in bioinformatics. To this end, we apply a nov...
Jun Huan, Wei Wang 0010, Deepak Bandyopadhyay, Jac...
3DPVT
2002
IEEE
121views Visualization» more  3DPVT 2002»
13 years 9 months ago
Analysis of Secondary Structure Elements of Proteins Using Indexing Techniques
In this paper we present a method for protein structure comparison that is based on indexing. Unlike most methods using indexing, ours does not use invariants of the C atoms of th...
Concettina Guerra, Stefano Lonardi, Giuseppe Zanot...