Sciweavers

258 search results - page 3 / 52
» Predicting protein folding pathways
Sort
View
ALMOB
2007
170views more  ALMOB 2007»
13 years 5 months ago
A spatio-temporal mining approach towards summarizing and analyzing protein folding trajectories
Understanding the protein folding mechanism remains a grand challenge in structural biology. In the past several years, computational theories in molecular dynamics have been empl...
Hui Yang, Srinivasan Parthasarathy, Duygu Ucar
BMCBI
2005
117views more  BMCBI 2005»
13 years 5 months ago
Graph-representation of oxidative folding pathways
Background: The process of oxidative folding combines the formation of native disulfide bond with conformational folding resulting in the native three-dimensional fold. Oxidative ...
Vilmos Ágoston, Masa Cemazar, Lászl&...
PPDP
2005
Springer
13 years 10 months ago
Heuristics, optimizations, and parallelism for protein structure prediction in CLP(FD)
The paper describes a constraint-based solution to the protein folding problem on face-centered cubic lattices—a biologically meaningful approximation of the general protein fol...
Alessandro Dal Palù, Agostino Dovier, Enric...
WABI
2007
Springer
13 years 11 months ago
Bringing Folding Pathways into Strand Pairing Prediction
Abstract. The topology of β-sheets is defined by the pattern of hydrogenbonded strand pairing. Therefore, predicting hydrogen bonded strand partners is a fundamental step towards...
Jieun K. Jeong, Piotr Berman, Teresa M. Przytycka
BIBM
2008
IEEE
172views Bioinformatics» more  BIBM 2008»
13 years 11 months ago
Boosting Methods for Protein Fold Recognition: An Empirical Comparison
Protein fold recognition is the prediction of protein’s tertiary structure (Fold) given the protein’s sequence without relying on sequence similarity. Using machine learning t...
Yazhene Krishnaraj, Chandan K. Reddy