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ISMB
1997
13 years 6 months ago
Protein Folding Class Predictor for SCOP: Approach Based on Global Descriptors
This workdemonstrates newtechniques developed for the prediction of protein folding class in the context of the most comprehensiveStructural Classification of Proteins (SCOP). The...
Inna Dubchak, Ilya B. Muchnik, Sung-Hou Kim
BIBE
2005
IEEE
13 years 7 months ago
A Multi-Level Approach to SCOP Fold Recognition
The classification of proteins based on their structure can play an important role in the deduction or discovery of protein function. However, the relatively low number of solved...
Keith Marsolo, Srinivasan Parthasarathy, Chris H. ...
BMCBI
2008
80views more  BMCBI 2008»
13 years 5 months ago
Towards an automatic classification of protein structural domains based on structural similarity
Background: Formal classification of a large collection of protein structures aids the understanding of evolutionary relationships among them. Classifications involving manual ste...
Vichetra Sam, Chin-Hsien Tai, Jean Garnier, Jean-F...
BMCBI
2006
180views more  BMCBI 2006»
13 years 5 months ago
Building multiclass classifiers for remote homology detection and fold recognition
Motivation Protein remote homology prediction and fold recognition are central problems in computational biology. Supervised learning algorithms based on support vector machines a...
Huzefa Rangwala, George Karypis
BMCBI
2006
114views more  BMCBI 2006»
13 years 5 months ago
A high level interface to SCOP and ASTRAL implemented in Python
Background: Benchmarking algorithms in structural bioinformatics often involves the construction of datasets of proteins with given sequence and structural properties. The SCOP da...
James A. Casbon, Gavin E. Crooks, Mansoor A. S. Sa...