67 search results - page 2 / 14 » Protein Sequence Pattern Mining with Constraints |
SDM
2009
SIAM
14 years 2 months ago
2009
SIAM
Discovering interesting patterns in event sequences is a popular task in the field of data mining. Most existing methods try to do this based on some measure of cohesion to deter...
GCB
2000
Springer
13 years 9 months ago
2000
Springer
We describe an algorithm for the automatic discovery of recurring patterns in protein structures. The patterns consist of individual residues having a defined order along the prote...
ICDE
2010
IEEE
13 years 9 months ago
2010
IEEE
Existing sequence mining algorithms mostly focus on mining for subsequences. However, a large class of applications, such as biological DNA and protein motif mining, require effici...
KDD
2002
ACM
14 years 5 months ago
2002
ACM
The 3D conformation of a protein may be compactly represented in a symmetrical, square, boolean matrix of pairwise, inter-residue contacts, or "contact map". The contact...
BICOB
2010
Springer
13 years 5 months ago
2010
Springer
Biomarker discovery for complex diseases is a challenging problem. Most of the existing approaches identify individual genes as disease markers, thereby missing the interactions a...