127 search results - page 2 / 26 » Structural Alignment of Pseudoknotted RNA |
ISMB
1997
13 years 6 months ago
1997
Seq7 is a newprogramfor generating multiple structure-based alignments of RNAsequences. Byusing a variant of Dijkstra’s algorithm to find the shortest path through a specially c...
GCB
2004
Springer
13 years 10 months ago
2004
Springer
: Pseudoknots are essential for the functioning of many small RNA molecules. In addition, viral RNAs often exhibit pseudoknots that are required at various stages of the viral life...
RECOMB
2009
Springer
14 years 5 months ago
2009
Springer
Prediction and alignment of RNA pseudoknot structures are NP-hard. Nevertheless, several efficient prediction algorithms by dynamic programming have been proposed for restricted cl...
ICPP
2006
IEEE
13 years 11 months ago
2006
IEEE
RNA pseudoknot prediction is an algorithm for RNA sequence search and alignment. An important building block towards pseudoknot prediction is RNA secondary structure prediction. T...
CORR
2006
Springer
13 years 5 months ago
2006
Springer
An RNA molecule is structured on several layers. The primary and most obvious structure is its sequence of bases, i.e. a word over the alphabet {A, C, G, U}. The higher structure i...