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GECCO
2004
Springer
128views Optimization» more  GECCO 2004»
13 years 11 months ago
An Informed Operator Based Genetic Algorithm for Tuning the Reaction Rate Parameters of Chemical Kinetics Mechanisms
A reduced model technique based on a reduced number of numerical simulations at a subset of operating conditions for a perfectly stirred reactor is developed in order to increase t...
Lionel Elliott, Derek B. Ingham, Adrian G. Kyne, N...
GECCO
2004
Springer
143views Optimization» more  GECCO 2004»
13 years 11 months ago
Efficient Clustering-Based Genetic Algorithms in Chemical Kinetic Modelling
Two efficient clustering-based genetic algorithms are developed for the optimisation of reaction rate parameters in chemical kinetic modelling. The genetic algorithms employed are ...
Lionel Elliott, Derek B. Ingham, Adrian G. Kyne, N...
ALIFE
2007
13 years 6 months ago
Life Cycle of a Minimal Protocell - A Dissipative Particle Dynamics Study
Cross-reactions and other systematic difficulties generated by the coupling of functional chemical subsystems pose the largest challenge for assembling a viable protocell in the la...
Harold Fellermann, Steen Rasmussen, Hans-Joachim Z...
TCSB
2010
13 years 4 months ago
Rule-Based Modeling of Transcriptional Attenuation at the Tryptophan Operon
Transcriptional attenuation at E.coli’s tryptophan operon is a prime example of RNA-mediated gene regulation. In this paper, we present a discrete stochastic model for this pheno...
Céline Kuttler, Cédric Lhoussaine, M...
DAC
2011
ACM
12 years 6 months ago
Synchronous sequential computation with molecular reactions
Just as electronic systems implement computation in terms of voltage (energy per unit charge), molecular systems compute in terms of chemical concentrations (molecules per unit vo...
Hua Jiang, Marc D. Riedel, Keshab K. Parhi