Sciweavers

CMSB
2004
Springer
13 years 10 months ago
Combining State-Based and Scenario-Based Approaches in Modeling Biological Systems
Biological systems have recently been shown to share many of the properties of reactive systems. This observation has led to the idea of using methods devised for the construction ...
Jasmin Fisher, David Harel, E. Jane Albert Hubbard...
SEMWEB
2005
Springer
13 years 10 months ago
Ontology Based Analysis of Experimental Data
We address the problem of linking observations from reality to a semantic web based knowledge base. Concepts in the biological domain are increasingly being formalized through ont...
Andrea Splendiani
DILS
2005
Springer
13 years 10 months ago
Support for BioIndexing in BLASTgres
The ability to perform genome-wide and cross-genome data analyses can dramatically reduce the time required for new biological discoveries. This raises important issues in bioinfor...
Ruey-Lung Hsiao, Douglas Stott Parker Jr., Hung-ch...
BIBE
2006
IEEE
138views Bioinformatics» more  BIBE 2006»
13 years 11 months ago
Assigning Schema Labels Using Ontology And Hueristics
Bioinformatics data is growing at a phenomenal rate. Besides the exponential growth of individual databases, the number of data depositories is increasing too. Because of the comp...
Xuan Zhang, Ruoming Jin, Gagan Agrawal
ANSS
2006
IEEE
13 years 11 months ago
iSimBioSys: A Discrete Event Simulation Platform for 'in silico' study of biological systems
With the availability of huge databases cataloguing the various molecular “parts” of complex biological systems, researchers from multiple disciplines have focused on developi...
Samik Ghosh, Preetam Ghosh, Kalyan Basu, Sajal K. ...
CONCUR
2007
Springer
13 years 11 months ago
Rule-Based Modelling of Cellular Signalling
Abstract. Modelling is becoming a necessity in studying biological signalling pathways, because the combinatorial complexity of such systems rapidly overwhelms intuitive and qualit...
Vincent Danos, Jérôme Feret, Walter F...
ISCAS
2007
IEEE
124views Hardware» more  ISCAS 2007»
13 years 11 months ago
A Brief Overview of the Complex Biological and Engineering Networks
— Over the last few decades, complex networks have been intensively studied throughout many fields of science, especially in biological and engineering sciences. This paper brie...
Jinhu Lu, Derong Liu
BIBM
2007
IEEE
171views Bioinformatics» more  BIBM 2007»
13 years 11 months ago
GenMiner: Mining Informative Association Rules from Genomic Data
GENMINER is a smart adaptation of closed itemsets based association rules extraction to genomic data. It takes advantage of the novel NORDI discretization method and of the CLOSE ...
Ricardo Martínez, Claude Pasquier, Nicolas ...
BIBE
2008
IEEE
106views Bioinformatics» more  BIBE 2008»
13 years 11 months ago
Digital preservation - financial sustainability of biological data and material resources
—Following the technological advances that have enabled genome-wide analysis in most model organisms over the last ten years, there has been unprecedented growth in genome and po...
C. Chandras, T. Weaver, Michael Zouberakis, John M...