Sciweavers

CSB
2005
IEEE
133views Bioinformatics» more  CSB 2005»
13 years 10 months ago
Choosing SNPs Using Feature Selection
A major challenge for genomewide disease association studies is the high cost of genotyping large number of single nucleotide polymorphisms (SNP). The correlations between SNPs, h...
Tu Minh Phuong, Zhen Lin, Russ B. Altman
CSB
2005
IEEE
114views Bioinformatics» more  CSB 2005»
13 years 10 months ago
Tree Decomposition Based Fast Search of RNA Structures Including Pseudoknots in Genomes
Searching genomes for RNA secondary structure with computational methods has become an important approach to the annotation of non-coding RNAs. However, due to the lack of effici...
Yinglei Song, Chunmei Liu, Russell L. Malmberg, Fa...
CSB
2005
IEEE
124views Bioinformatics» more  CSB 2005»
13 years 10 months ago
Identifying Local Gene Expression Patterns in Biomolecular Networks
This study is aimed at elucidating putative transcription regulators (TRs) responsible for the observed differential expression pattern. Combined direct promoter binding and indir...
Andrey Y. Sivachenko, Anton Yuryev, Nikolai Darase...
CSB
2005
IEEE
110views Bioinformatics» more  CSB 2005»
13 years 10 months ago
A Topological Measurement for Weighted Protein Interaction Network
High-throughput methods for detecting protein-protein interactions (PPI) have given researchers an initial global picture of protein interactions on a genomic scale. The usefulnes...
Pengjun Pei, Aidong Zhang
CSB
2005
IEEE
131views Bioinformatics» more  CSB 2005»
13 years 10 months ago
Current Challenges in Bioimage Database Design
Information technology research has played a significant role in the high-throughput acquisition and analysis of biological information. The tremendous amount of information gath...
Ambuj K. Singh, Arnab Bhattacharya, Vebjorn Ljosa
CSB
2005
IEEE
131views Bioinformatics» more  CSB 2005»
13 years 10 months ago
Phylogenetic Postprocessing
Nicholas D. Pattengale, Bernard M. E. Moret
CSB
2005
IEEE
133views Bioinformatics» more  CSB 2005»
13 years 10 months ago
Creating a Protein Ontology Resource
Protein Data Integration approaches at the moment considers data sources as data repositories, but not as applications; which in turn may embody complex interactions with other da...
Amandeep S. Sidhu, Tharam S. Dillon, Elizabeth Cha...
CSB
2005
IEEE
13 years 10 months ago
Two-way clustering of gene expression profiles by sparse matrix factorization
Alberto D. Pascual-Montano, Francisco Tirado, Pedr...
CSB
2005
IEEE
167views Bioinformatics» more  CSB 2005»
13 years 10 months ago
SinicView: An Interactive Visualization Tool for Comparison of Multiple Sequence Alignment Results
In the initial stage of sequence analysis, a biologist is first faced with the questions about how to choose the best tool to align sequences of interest and how to analyze and v...
Arthur Chun-Chieh Shih, D. T. Lee, Laurent Lin, Ch...