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AUSDM
2006
Springer
107views Data Mining» more  AUSDM 2006»
13 years 9 months ago
Using a Kernel-Based Approach to Visualize Integrated Chronic Fatigue Syndrome Datasets
We describe the use of a kernel
Ahmad Al-Oqaily, Paul J. Kennedy
BIBE
2007
IEEE
127views Bioinformatics» more  BIBE 2007»
13 years 9 months ago
Gene Selection via Matrix Factorization
The recent development of microarray gene expression techniques have made it possible to offer phenotype classification of many diseases. However, in gene expression data analysis...
Fei Wang, Tao Li
HICSS
2002
IEEE
127views Biometrics» more  HICSS 2002»
13 years 10 months ago
Interactive Visualization and Analysis for Gene Expression Data
Currently, the cDNA and genomic sequence projects are processing at such a rapid rate that more and more gene data become available. New methods are needed to efficiently and eff...
Chun Tang, Li Zhang, Aidong Zhang
GECCO
2003
Springer
141views Optimization» more  GECCO 2003»
13 years 10 months ago
Finding the Optimal Gene Order in Displaying Microarray Data
The rapid advances of genome-scale sequencing have brought out the necessity of developing new data processing techniques for enormous genomic data. Microarrays, for example, can g...
Seung-Kyu Lee, Yong-Hyuk Kim, Byung Ro Moon
GECCO
2003
Springer
191views Optimization» more  GECCO 2003»
13 years 10 months ago
Artificial Immune System for Classification of Gene Expression Data
DNA microarray experiments generate thousands of gene expression measurement simultaneously. Analyzing the difference of gene expression in cell and tissue samples is useful in dia...
Shin Ando, Hitoshi Iba
CSB
2003
IEEE
123views Bioinformatics» more  CSB 2003»
13 years 10 months ago
Fourier Harmonic Approach for Visualizing Temporal Patterns of Gene Expression Data
DNA microarray technology provides a broad snapshot of the state of the cell by measuring the expression levels of thousands of genes simultaneously. Visualization techniques can ...
Li Zhang, Aidong Zhang, Murali Ramanathan
CEC
2003
IEEE
13 years 10 months ago
Stochastic neural network models for gene regulatory networks
AbstractRecent advances in gene-expression profiling technologies provide large amounts of gene expression data. This raises the possibility for a functional understanding of geno...
Tianhai Tian, Kevin Burrage
VLDB
2004
ACM
115views Database» more  VLDB 2004»
13 years 10 months ago
Semantic Mining and Analysis of Gene Expression Data
Association rules can reveal biological relevant relationship between genes and environments / categories. However, most existing association rule mining algorithms are rendered i...
Xin Xu, Gao Cong, Beng Chin Ooi, Kian-Lee Tan, Ant...
PPSN
2004
Springer
13 years 10 months ago
Searching Transcriptional Modules Using Evolutionary Algorithms
The mechanism of gene regulation has been studied intensely for decades. It is important to identify synergistic transcriptional motifs. Its search space is so large that an effici...
Je-Gun Joung, Sok June Oh, Byoung-Tak Zhang
GFKL
2005
Springer
141views Data Mining» more  GFKL 2005»
13 years 10 months ago
On External Indices for Mixtures: Validating Mixtures of Genes
Mixture models represent results of gene expression cluster analysis in a more natural way than ’hard’ partitions. This is also true for the representation of gene labels, such...
Ivan G. Costa, Alexander Schliep